Events: CSP Lunch Seminars
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Molecular Dynamics Simulation of Polyelectrolyte Packaging in a Nanocavity
Guest: Qianqian Cao
Tuesday, October 30, 2012 12:30 pm - 1:30 pm
Location: CSP Conference Room (322) -
Multiscale Modeling of Tumor Development
Guest: Yi Jiang, Georgia State University
Tuesday, October 23, 2012 12:30 pm - 1:30 pm
Location: CSP Conference Room (322) -
Effects of the potential width on the folding behavior of flexible polymers
Guest: Jonathan Gross
Tuesday, October 9, 2012 12:30 pm - 1:30 pm
Location: CSP Conference Room (322) -
Simulating the Transverse Ising Model on a Quantum computer with Surface Code
Guest: Hao You
Tuesday, September 25, 2012 12:30 pm - 1:30 pm
Location: CSP Conference Room (322) -
Simulating the Transverse Ising Model on a Quantum computer with Surface Code
Guest: Hao You
Tuesday, September 18, 2012 12:30 pm - 1:30 pm
Location: CSP Conference Room (322) -
Using UGA's Advanced Computing Resources
Guest: Shan-Ho Tsai
Tuesday, September 11, 2012 12:30 pm - 1:30 pm
Location: CSP Conference Room (322) -
Soaring through the Galaxy at 1/3000 times the Speed of Light - Part 2
Guest: Robin Shelton
Tuesday, August 28, 2012 12:30 pm - 1:30 pm
Location: CSP Conference Room (322) -
Soaring through the Galaxy at 1/3000 times the Speed of Light
Guest: Robin Shelton
Tuesday, August 21, 2012 12:30 pm - 1:30 pm
Location: CSP Conference Room (322) -
Construct hierarchical metastable states networks from molecular dynamics simulations by trajectory mapping and clustering
Guest: Professor Xin Zhou, Chinese Academy of Sciences
Thursday, August 2, 2012 3:30 pm - 4:30 pm
Location: CSP Conference Room (322)Constructing metastable states networks in high-dimensional conformational space can greatly improve the understanding of complex molecular systems, such as DNA an proteins and furthermore enhance efficient of simulations.
The high-dimensional free energy landscape and dynamical properties of systems can be honestly reproduced with the network representation without requiring a priori assumptions about reaction coordinates. We develop a method for naturally reconstruct the hierarchical transition networks among metastable states. Multiple (short) simulation trajectories are generated in parallel, and each trajectory is mapped into a high-dimensional vector with the averages of lots of conformational functions along the trajectory as its components. The linear space spanned by the trajectory-mapped vectors has the same structure as that spanned by the conformational probability density functions of these trajectories, thus simple linear algebraic analyses on the mapped vectors can identify metastable states, transition kinetics as well as transition pathways of the simulation trajectories. The method is useful in data analysis of high-dimensional time sequences. and comparison of two experimental samples. We illustrate the application of the method to understand folding-unfolding dynamics and mechanisms of polypeptides.
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Spin Lattice Dynamics - A work in progress
Guest: Dilina Perera
Tuesday, July 24, 2012 12:30 pm - 1:30 pm
Location: CSP Conference Room (322) -
Magnetic nano-vortices - Three possible applications
Guest: Bismarck da Costa, Universidade Federal de Minas Gerais
Tuesday, July 17, 2012 12:30 pm - 1:30 pm
Location: CSP Conference Room (322) -
An experience sharing on effective research and time management for graduate students
Guest: Ying Wai Li
Tuesday, July 10, 2012 12:30 pm - 1:30 pm
Location: CSP Conference Room (322)This talk bears two purposes. I will mainly share some experiences on what a graduate student can do and things to pay attention to at different stages, in order to build up research experiences, skills and efficiency. Along the way, I will introduce a few little tools and tricks to help saving time on some everyday tasks, like paper searching, bookkeeping, managing data etc.
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The importance of the density of states: It's counting that counts
Guest: Greg Brown, Oak Ridge National Lab and Florida State University
Tuesday, June 26, 2012 12:30 pm - 1:30 pm
Location: CSP Conference Room (322) -
Vacancy Interactions on SnO2 Nanofilms: Learning First-Principles Condensed Matter Physics
Guest: Daniel Cellucci
Tuesday, June 19, 2012 12:30 pm - 1:30 pm
Location: CSP Conference Room (322) -
The X-ray Background: Accretion's Rosetta Stone
Guest: Aden Draper, Georgia Tech
Tuesday, May 29, 2012 3:30 pm - 4:30 pm
Location: CSP Conference Room (322) -
An R-matrix approach for plasma modeling and the intepretation of astrophysical plasmas
Guest: Connor Ballance, Dept. of Physics, Auburn University
Tuesday, April 24, 2012 12:30 pm - 1:30 pm
Location: CSP Conference Room (322) -
A study of magnetic nanoparticles via Computer Simulation
Guest: Julio Rocha
Tuesday, April 10, 2012 12:30 pm - 1:30 pm
Location: CSP Conference Room (322) -
Modified Late-time Domain Growth Behavior Due to Compressibility
Guest: Meng Meng
Tuesday, March 20, 2012 12:30 pm - 1:30 pm
Location: CSP Conference Room (322) -
Applications of Radiation Hydrodynamics in Inertial Confinement Fusion
Guest: Yanbo Shi
Tuesday, March 6, 2012 12:30 pm - 1:30 pm
Location: CSP Conference Room (322) -
Universality of the order parameter probability distribution function: symmetric and asymmetric cases: Ising and Blume-Capel model as examples
Guest: Joao Plascak, Universidade Federal de Minas Gerais
Tuesday, February 14, 2012 12:30 pm - 1:30 pm
Location: CSP Conference Room (322) -
Law of Rectilinear Diameter and the Scaling Function of Liquid-Vapour Transition: corrections to scaling versus mixing fields
Guest: Joao Plascak, Universidade Federal de Minas Gerais
Tuesday, February 7, 2012 12:30 pm - 1:30 pm
Location: CSP Conference Room (322) -
Short review: RG ideas part II Law of Rectilinear Diameter
Guest: Joao Plascak, Universidade Federal de Minar Gerais
Tuesday, January 31, 2012 12:30 pm - 1:30 pm
Location: CSP Conference Room (322) -
Scaling Hypothesis, Universality, Renormalization Group Ideas
Guest: Joao Plascak, Universidade Federal de Minas Gerais
Tuesday, January 24, 2012 12:30 pm - 1:30 pm
Location: CSP Conference Room (322) -
Simple Magnetic models exhibiting continuous and discontinuous transitions (a simulation point of view, showing the droplet model for the continuous phase transition-an extension to the tricritical point)
Guest: Joao Plascak
Tuesday, January 17, 2012 12:30 pm - 1:30 pm
Location: Room 322, CSP Conference Room -
Introduction to Phase Transitions and Critical Points: An experimental realization of a critical point between coexisting phases of methanol-hexane mixtures
Guest: Prof. Joao Plascak, Universidade Federal de Minas Gerais
Tuesday, January 10, 2012 12:30 pm - 1:30 pm
Location: Room 322, CSP Conference Room
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