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Recent Publications From the MRI Physics Lab
Journal Articles and
Book Chapters
2012
32.
Degang Zhang, Lei Guo, Dajiang Zhu, Kaiming Li, Longchuan Li, Hanbo Chen, Qun
Zhao, Xiaoping Hu, and Tianming Liu. Diffusion Tensor Imaging Reveals
Evolution of Primate Brain Architectures. Brain
Structure and Function Published on line Nov., 2012 doi:10.1007/s00429-012-0468-4
31. Jingxin Nie, Lei Guo, Kaiming Li, Yonghua Wang, Guojun Chen, Longchuan
Li, Hanbo Chen, Fan Deng, Xi Jiang, Tuo Zhang, Ling Huang, Carlos Faraco,
Degang Zhang, Xintao Hu, Gang Li, Jinglei Lv, Yixuan Yuan, Dajiang Zhu,
Junwei Han, Dean Sabatinelli, Qun Zhao,
Haini Cai, L Stephen Miller, Bingqian Xu, Ping Shen, Xiaoping Hu, Tianming
Liu. Axonal
Fiber Terminations Concentrate on Gyri. Cerebral Cortex December 2012;22:2831-2839,
doi:10.1093/cercor/bhr361
30. Abell, J.,
Lee, J., Szu, H., Zhao, Q., Zhao,
YP. "Differentiating
Intrinsic SERS Spectra from a Mixture by Sampling Induced Composition
Gradient and Independent Component Analysis". Analyst Jan. 2012, 137,
73-76, DOI:
10.1039/c1an15623c
2011
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29
28.
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Langley, J., Potter, W., Huang,
F., and Zhao*, Q. A
self-reference PRF-shift MR thermometry method utilizing the phase
gradient. Dec. 2011 Phys.
Med. Biol.
56 N307 doi:10.1088/0031-9155/56/24/N02
Lee, J., Platt,S., Kent, M., and Zhao, Q. "An
analysis of the pharmacokinetic parameter ratios in DCE-MRI using the reference
region model." Magnetic Resonance Imaging 2012
Jan;30(1):26-35. doi: 10.1016/j.mri.2011.09.005. Epub 2011 Nov 8.
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27.
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McCully, KK.,
Mulcahy, TA., Ryan, T., and Zhao, Q. " Skeletal muscle
metabolism in individuals with spinal cord injury." Journal of
Applied Physiology 111(1):143-148, 2011
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26.
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Zhao, Q., Langley, J., Lee, S., and Liu, W. "Positive contrast technique
for detection and quantification of superparamagnetic iron oxide
nanoparticles in magnetic resonance imaging." NMR in
Biomedicine 24(5): 464-472, 2011
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25.
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Langley, J., Liu,
W., Jordon, E. K.., Frank, J. A., and Zhao Q. "Quantification of SPIO
nanoparticles in vivo using the finite perturber method."
Magnetic Resonance in Medicine 65(5):1461-1469, 2011
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2010
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24.
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Li, K., Guo, L.,
Nie, J., Faraco, C., Cui, G., Zhao, Q., and Miller, L., "Gyral folding
patterns via surface profiling." Neuroimage, 52(4):1202-14,
2010
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23.
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Langley, J., Brice,
R., and Zhao, Q., "A recursive approach to
the moment-based phase unwrapping algorithm." Applied Optics
49(16):3096-3101, 2010
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22.
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Zhao, Q., Lee, S., Kent, M., Schatzberg, S., and
Platt, S. "Dynamic
contrast enhanced magnetic resonance imaging of canine brain tumors."
Veterinary Radiology & Ultrasound. 51(2):122-129, 2010
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2009
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21.
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McCully, K., Turner,
T., Langley, J., and Zhao, Q. "The reproducibility of
measurements of intramuscular magnesium concentrations."
Dynamic Medicine, 8:5, 2009
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20.
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Langley, J., and Zhao,
Q. "A
model based three-dimensional phase unwrapping algorithm using Gegenbauer
polynomials." Physics in Medicine and Biology.
54(17):5237-5252, 2009
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19.
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Langley, J. and Zhao,
Q. "Unwrapping
MR phase maps with Chebyshev polynomials." Magnetic Resonance
Imaging, 27(9):1293-1301, 2009
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18.
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Zhao, Q., Langley, J., Faraco, C., and Miller, LS.
"Correction
of Susceptibility-Induced Distortion in Diffusion Tensor Imaging with
Moment-Based Phase Unwrapping Method." International Journal
Functional Informatics and Personalized Medicine; 2(2):136-149, 2009
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17.
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Y. -J. Liu, Z. -Y.
Zhang, Q. Zhao, R. A. Dluhy and Y. -P. Zhao.
"The surface enhanced
Raman scattering from Ag nanorod array substrate: the site dependent
enhancement and layer absorbance effect." The Journal of
Physical Chemistry C, 2009
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16.
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Yanasak, N.,
Allison, JD., Hu, TC, and Zhao, Q. "The Use of Novel Gradient
Directions with DTI to Synthesize Data with Complicated Diffusion Behavior."
Medical Physics 2009
May;36(5):1875-85.
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15
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Z. -Y. Zhang, Y.
-J. Liu, Q. Zhao, and Y. -P. Zhao.
"The effect of layer
absorbance for complex surface enhanced Raman scattering substrates."
Appl. Phys. Lett. 94, 143107 (2009)
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14.
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Liu YJ., Zhang, Zy.,
Zhao, Q., Dluhy, RA. and Zhao, YP. "The Role of the Nano-spine in
the Nanocomb Arrays." Applied Physics Letters, 94, 033103
(2009)
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13
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Kirk J.
Cureton, Phillip D. Tomporowski, Arpit Singhal, Jeffrey D. Pasley, ,
Kevin A. Bigelman, Kathleen Lambourne, Jennifer L. Trilk, Kevin K. McCully
and Qun Zhao "DIETARY
QUERCETIN SUPPLEMENTATION IS NOT ERGOGENIC IN UNTRAINED MEN". J
Appl Physiol (August 13, 2009).
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2008
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12.
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Yanasak N, Allison
JD, Zhao Q, Hu TC-C, and Dhandapani K. "Non-Uniform
Gradient Prescription for Precise Angular Measurements Using
DTI" Med
Image Comput Comput Assist Interv Int Conf Med Image Comput Comput Assist
Interv. 2008;11 (Pt 1):866-73.
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11.
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Liu, YJ, Zhang ZY, Zhao,
Q., Zhao, YP. "Revisiting
the Separation Dependent Surface Enhanced Raman Scattering."
Applied Physics Letters, 93(17), 173106, (2008)
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10.
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Jae-Min Lee, Jing
Hu, Jian-Bo Gao, Bruce Crosson, Kyung K Peck, Christina E
Wierenga, Keith M McGregor, Zhao, Q. Keith White. "Discriminating
brain activity from task-related artifacts in functional MRI: Fractal
scaling analysis simulation and application." NeuroImage 40
(2008), 197-212.
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2007
2006
Prior to
2006
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7.
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Zhao, Q., Principe, J., Fitzsimmons, J., Bradley,
M., and Lang, P.(2002) “An information-theoretic approach to functional
Magnetic Resonance Imaging activation analysis.” Chapter 9, Biocomputing,
edited by P. Pardalos and J. Principe, Kluwer Academic Publishers (2002)
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6.
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Zhao, Q., and Principe, J. "Support Vector Machines for
SAR Automatic Target Recognition." IEEE Transactions on
Aerospace and Electronics, 37(2), 643-654, Apr. 2001.
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5.
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Zhao, Q., Principe, J., Brennan, V., Xu, D.,and
Wang, Z. (2000). "SAR
Automatic Target Recognition with Three Strategies of Learning and
Representation." Optical Engineering, 39(5), 1230-1244,
May. 2000.
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4.
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Zhao, Q., Principe, J.C., Bradley, M.M., Lang, P.J.
“fMRI
Analysis: Distribution divergence measure based on quadratic entropy.”
NeuroImage, 11(5): S521 (2000)
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3.
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Principe, J., Xu,
D., Zhao, Q., and J. Fisher III “Learning from examples
with information-theoretic criteria.” Journal of VLSI Signal
Processing Systems 26, 61-77, 2000.
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2.
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Zhao,Q. and Bao,Z. "Target Recognition
Using a Radial Basis Function Neural Network." Neural
Networks, 9(4), pp.709-720 (1996)
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1.
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Zhao,Q. and Bao,Z. "Target classification based
on neural networks." Journal of Electronics, 13(1),
pp.1-10 (1996)
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Conference
Proceedings and Posters
2011
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25.
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Wang, L. and Zhao, Q. Susceptibility
quantification in MRI using Phase Gradient Mapping. Proceedings of the 20th
Annual Meeting of the International Society for Magnetic Resonance in
Medicine, Montreal, Canada, 2011, p.4479.
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24.
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Langley, J., Lee, S., Wang, L., and Zhao, Q.
Differentiation of superparamagnetic iron oxide nanoparticles and air
pockets using independent component analysis. Proceedings of the 20th
Annual Meeting of the International Society for Magnetic Resonance in
Medicine, Montreal, Canada, 2011, p.4541
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23.
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Zhao, Q., Langley J., Lee, J., Abell, J., and Zhao, Y.
Bioimaging and biospectra analysis by means of ICA: experimental
results.Proceedings of the SPIE Volume: 8058, Orlando, FL, April 27-29,
2011, p.8058-14 (invited talk)
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22..
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Wang, L., Langley
J., and Zhao, Q. Susceptibility quantification in MRI using modified
conjugate least square method.Proceedings of the SPIE Volume: 7961,
Orlando, FL, February 13-17, 2011, p.7961-138
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2010
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21.
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Langley, J. and Zhao,
Q. Evaluation of a self-reference MR thermometry method based on the
phase gradient. MR Saftey: RF Heating of the Human in MRI Workshop,
Stillwater, MN
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20.
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Potter, W.M., Wang, L., McCully, K., and Zhao, Q. A
simulational study on the homogeneity of dual-tuned birdcage coils.
Proceedings of the 19th Annual Meeting of the International Society
for Magnetic Resonance in Medicine, Stockholm, Sweden, 2010, p.1485
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19.
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Langley, J and Zhao,
Q. A self-reference MR thermometry method utilizing the phase gradient.
Proceedings of the 19th Annual Meeting of the International Society for
Magnetic Resonance in Medicine, Stockholm, Sweden, 2010, p. 1831
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18.
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Langley, J., Jordan,
E.K., Liu, W., Frank, J.A., and Zhao, Q. In vivo
quantification of SPIO nanoparticles with phase gradient mapping. Proceedings
of the 19th Annual Meeting of the International Society for Magnetic
Resonance in Medicine, Stockholm, Sweden, 2010, p. 1909
|
2009
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17.
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Langley, J and Zhao,
Q. Quantification of SPIO nanoparticles using Phase Gradient Mapping.
Proceedings of the 31th Annual International IEEE EMBS
Conference, Minneapolis, MN, September 2-6, 2009, p. 3605-3608.
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16.
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Langley, J and Zhao,
Q. A Three-Dimensional Phase Unwrapping Algorithm Based on an Expansion
in Terms of Chebyshev Polynomials. Proceedings of the 18th Annual Meeting
of the International Society for Magnetic Resonance in Medicine, Honolulu,
Hawaii, 2009, p.2914.
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15.
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Lee,
S., Langley, J., Liu, W., and Zhao, Q. Phase gradient mapping for positive
contrast generation. Proceedings of the 18th Annual Meeting of the
International Society for Magnetic Resonance in Medicine, Honolulu, Hawaii,
2009, p.899.
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14.
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Kaiming Li, Lei Guo, Gang Li, Jingxin Nie, Carlos Faraco, Qun
Zhao, L. Stephen Miller and Tianming Liu. Gyral Folding Pattern
Analysis via Surface Profiling. 12th International Conference on Medical
Image Computing and Computer Assisted Intervention (MICCAI), London,
2009
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13.
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Zhao, Q. and Langley, J., Probing the physiological
activity on fMRI time series, Proceedings of the 15th Annual
Meeting of the Organization for Human Brain Mapping, San Francisco, CA,
2009, Poster Number 390. .
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12.
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Faraco, C., Smith,
D., Langley, J., Zhao, Q. and Miller, LS, Mapping the working
memory network using the OSPAN task, Proceedings of the 15th
Annual Meeting of the Organization for Human Brain Mapping, San Francisco,
CA, 2009, Poster Number 539.
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2008
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11.
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Langley, J. and Zhao,
Q. "Unwrapping MR Phase Maps with Chebyshev Moments."
Proceedings of the 30th Annual International IEEE EMBS Conference,
Vancouver, BC, August 20-24, p. 4043-4046.
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10.
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Lee, S. and Zhao,
Q. "Estimation of field maps with susceptibility gradient
mapping." Proceedings of the 17th Annual Meeting of the International
Society for Magnetic Resonance in Medicine, 2008
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9.
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Yanasak, N.,
Allison, J., Zhao, Q., and Hu, T. "Three Novel Methods for
Studying Complicated Diffusion Behavior Using Simple Capillary
Structures." Proceedings of the 17th Annual Meeting of the
International Society for Magnetic Resonance in Medicine, 2008
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8.
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Faraco, C., Macky,
J., Yanasak, N., Zhao, Q., Miller, LS.
Connectivity of the human working memory system.
Society for Neuroscience Annual Meeting. Nov. 2008
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7.
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Yanasak, N.,
Allison, J , Zhao, Q. , Hu, T., Dhandapani, K. The Benefits of
Non-Uniform Gradient Direction Specification in DTI: Simulations and
Phantom Data. 50th AAPM Annual Meeting, Houston, TX, 2008
|
2007
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6.
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Zhao, Q., T. W. Conway, K. D. White, K. McGregor, A.
Ford, and B. Crosson "Test-retest Reliability of functional MRI using
Smart Phantom: Analysis II." Proceedings of the 16th Annual Meeting of
the International Society for Magnetic Resonance in Medicine. P1855, 2007
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5.
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Yanasak, N.,
Allison, J., Zhao, Q., and Hu, T. "Use of novel gradient
directions to synthesize complex diffusion geometries: when a hot dog is a
pancake." AAPM (American Association of Physicists in Medicine) 49th
Annual Meeting, 2007
|
2006
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4.
|
Zhao, Q., White, KD, Conway, T., Crosson, B.
“Test-Retest reliability of fMRI using SmartPhantom” 15th Annual Meeting of
the International Society for Magnetic Resonance in Medicine, Seattle, WA,
May 6-12, 2006, p.2835.
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3.
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Zhao, Q., White, KD “Calibration of fMRI by
Simulating BOLD Contrast in the Living Human Brain” 15th Annual Meeting of
the International Society for Magnetic Resonance in Medicine, Seattle, WA,
May 6-12, 2006, p.2832.
|
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2.
|
Lee, J., Zhao, Q.,
Gao, J., White,KD. “fMRI quality assurance using phase space reconstruction
of SmartPhantom simulations of BOLD contrast” 15th Annual Meeting of the
International Society for Magnetic Resonance in Medicine, Seattle, WA, May
6-12, 2006, p.3266.
|
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1.
|
Li, Y., Zhao, Q.,
et. al. “Characterization and suppression of system noise due to scanner
instability in fMRI using a SmartPhantom BOLD simulator” International
Society for Magnetic Resonance in Medicine 15th Scientific Meeting and
Exhibition, Seattle, WA, May 6-12, 2006, p. 2802.
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